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    di Bernardo Lab - Systems and Synthetic Biology Lab
    You are here: Home Internal Site DRY LAB MATLAB STUFF GO Enrichment Analysis

    GO Enrichment Analysis

    connect to the cluster and run Matlab

    cd belcastro/GO_enrichment/functions global myGO load ../myGO.mat

    GO_Enrichment(pp,species,class) "diplay Enriched GO terms whos Corrected p-value is <.05

    - pp = list of probesets ("HG-U133A probesets for humnan" or "Mouse430_2 probesets for mouse") - class = BP: Biological Process - MF: Molecular Function - CC: Cellular Component